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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905503.1_cds_XP_016455759.1_49661
CDS Infomation

[gene=LOC107779787] [db_xref=GeneID:107779787] [protein=sodium/hydrogen exchanger 1-like] [protein_id=XP_016455759.1] [location=join(5427..5603,5726..5844,6668..6765,6879..6938,7037..7083,7168..7362,7453..7499,7632..7698,7800..7900,7989..8090,8200..8338,8698..8760,8892..8975,9145..9477)] [gbkey=CDS]
Sequence

ATGGCGGGGTCTGACATCGGGGCGCTGCTGGAAAAGCTGAAGATGCTATGGACCTTAGAT
CATGGGTCTGTGGTGTCAATAAACTTATTTGTTGCACTTATGTGCGCGTGTATCGTGATT
GGTCATCTATTGGAGGAGAACCGCTGGATGAATGAGTCGATAACTGCTCTTACGATTGGC
CTGTGCACGGGAGTTTGGATTCTACTAATAAGTGGAGGGAAGAGTTCGCATGTTTTCATG
TTCAGCGCAGATCTTTTCTTTATTTATCTTCTTCCACCGATCATTTTTAATGCTGGGTTC
CAGGTGAAAAAGAAACAATTCTTCCGCAATTTCATGACTATCATACTTTTTGGGGCACTT
GGTACTCTGATATCTTTTGTAATCATATCATTAGGTGCTATTGGAATTTTCAGGAAAATG
AATATTGGGAAACTTGAAATTGGAGATTACCTTGCAATTGGAGCAATCTTCTCTGCAACA
GATTCTGTTTGCACCTTACAAGTGCTTAATCAGGACGAAACGCCATTATTGTACAGTTTA
GTCTTTGGGGAAGGTGTTTTAAATGATGCTACATCTGTAGTTTTATTCAATGCTGTCCAG
AACTTTGACTTGTCTCATATCAACACTAGCATTGCCCTGCAATTACTTGGAAACTTTCTA
TACTTGTTTATCTCAAGCACCTTCCTGGGGTTTGTCGCTGGTCTATTGAGTGCCTATATT
ATTAAGAAGCTCTGCTTTGGAAGGCACTCCACTGATCGTGAAGTTTCTATAATGATACTC
ATGGCGTACCTATCTTACATGCTTGCTGAATTATTCAATTTAAGCGCAATTCTCACGGTG
TTCTTTTGCGGGATTGTGATGTCCCACTACACCTGGCATAACGTGACTGAGAACTCAAGA
TGCACCACCAAGCACACCTTTGCTACGCTATCGTTTGTTGCTGAAATTTTCATATTCCTC
TATGTTGGTATGGATGCTTTGGACATTGAAAAGTGGAGATTTGTTAGCGACAGCCCTGGA
ATATCAGTTGAGGTTAGCTCAATACTATTGGGACTTGTCTTGGTTGGAAGGGCAGCCTTT
GTTTTCCCCTTGTCATTTCTATCCAACTTGACCAAGAAGTCTCCACATGAGAAGATTGAC
TTCAAGCAGCAGGTCATAATATGCTGGGCTGGCCTTATGCGAGGTGCCGTTTCTATGGCC
CTTGCTTATAATCAGTTTACTAAAGAAGGTCATACTCAGTTGCGCGGCAATGCAATAATG
ATCACAAGTACTATCACAGTTGTCCTATTCAGCACAGTGGTATTTGGTTTGATGACAAAA
CCATTGATTAGACTATTGCTACCCTCACCAGGGACTCCAAAATCTTTCATTAATGTGCCA
CTTCTAGGCAATGGACGAGACTCGGAAGCCGATCTAGGAGCCCACAATTTTCCCCGTCCA
AACAGCTTGCGGATGTTCTTAAGTACCCCTTCTTATACAGTGCACTATTACTGGAGAAAG
TTCGATAATACATTCATGCGTCCTGTTTTCGGGGGACGAGGTTTTGTACCTTATGCTCCT
GGAACACCGACTGAAGGAAGTGAACCAACAATGGCATTGATGGAAAGTCAGAAAGTCCAT
TCAGTCTTGTGA

Peptide Sequence

PEP ID

XP_016455759.1
PEP Infomation

PREDICTED: sodium/hydrogen exchanger 1-like [Nicotiana tabacum]
Sequence

MAGSDIGALLEKLKMLWTLDHGSVVSINLFVALMCACIVIGHLLEENRWMNESITALTIG
LCTGVWILLISGGKSSHVFMFSADLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIILFGAL
GTLISFVIISLGAIGIFRKMNIGKLEIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSL
VFGEGVLNDATSVVLFNAVQNFDLSHINTSIALQLLGNFLYLFISSTFLGFVAGLLSAYI
IKKLCFGRHSTDREVSIMILMAYLSYMLAELFNLSAILTVFFCGIVMSHYTWHNVTENSR
CTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVSDSPGISVEVSSILLGLVLVGRAAF
VFPLSFLSNLTKKSPHEKIDFKQQVIICWAGLMRGAVSMALAYNQFTKEGHTQLRGNAIM
ITSTITVVLFSTVVFGLMTKPLIRLLLPSPGTPKSFINVPLLGNGRDSEADLGAHNFPRP
NSLRMFLSTPSYTVHYYWRKFDNTFMRPVFGGRGFVPYAPGTPTEGSEPTMALMESQKVH
SVL

Transcript Sequence

Gene sequence data has not been registered.